Plot NONMEM parameter estimation by iteration.

plot_nmprogress returns a plot or set of plots showing the evolution of parameter estimates by iteration.

Usage

plot_nmprogress(
  fileName,
  fileExt = ".lst",
  metric = "perc",
  lineCol = "#902C10",
  idlineCol = "black"
)

Arguments

fileName

A NONMEM output file prefix, without extension (e.g. 'run315').

fileExt

The file extension for NONMEM output, set to '.lst' by default.

metric

What to show in the plot. Allowed options are 'est' (the actual estimate) or 'perc' (the percentage change in the estimated or OFV since estimation began). Default is 'perc'.

lineCol

Line color. Default is '#902C10'.

idlineCol

Identity line color (only used if 'perc' metric is selected). Default is black.

Value

A set of plots.

See also

NONMEM (https://www.iconplc.com/innovation/nonmem/)

Author

Justin Wilkins, justin.wilkins@occams.com

Examples

if (FALSE) { # \dontrun{
plot_nmprogress("run315")
plot_nmprogress("run315", ".nmlst")
} # }